Conda - modules
Conda is an open-source package management system and environment management system that runs on Windows, macOS and Linux (available in Metacentrum). Conda quickly installs, runs and updates packages and their dependencies. Conda easily creates, saves, loads and switches between environments on the computer. In Metacentrum Conda is used for managing of python tools.
conda-modules-py35 - Conda version 4.8.3
conda-modules-py37 - Conda version 4.8.3
Conda is released under the 3-clause BSD license.
All Metacentrum users are eligible to use Conda modules and installed environments.
#load initial Conda module module add conda-modules-py37 #check the list of installed environments conda env list #acrivate selected environment conda activate busco_4.0.6 #use application busco --help #quit and leave environment conda deactivate
list of available environments in both Conda modules:
antismash busco_4.0.6 deepsignal dekupl flair2 hamster infernal medaka mitos nanoplot openMM orgasm picrust picrust2 py2713 py37 pyclone pyseg pyseg_system qiime2-2020.2 tepid tombo
Note: Of course, all Metacentrum users are eligible to install tools via Conda in their home directory. The following manual can be very useful.