ABySS

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Description

PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood.

Availability

Program is available in version 1.9.0

Use

Initialize enviroment ("module add abyss-1.9.0") and run "abys-pe". Or run "abyss-pe np=8" for 8 thread version, or "mpirun -np 8 ABYSS-P" from MPI version (add openmpi modul too).

Licence

GNU GPL.

Documentation

http://www.bcgsc.ca/downloads/abyss/doc

Program manager

meta@cesnet.cz

Homepage

http://www.bcgsc.ca/platform/bioinfo/software/abyss