Nanopore sequencing - data analysis tools

Description

Nanopore sequencing is a third generation approach used in the direct sequencing of biopolymers specifically, polynucleotides in the form of DNA or RNA.

Availability

Here you can find a list of available applications for nanopore data processing.

• Nanopolish - A software package for signal-level analysis of Oxford Nanopore sequencing data
• Guppy - Basecaller
• Tombo - Analysis of modified nucleotides
• Python tools available via a module called Python modules, e.g.
  • NanoComp
  • NanoPlot
  • NanoStat
  • NanoFilt
  • ont_fast5_api

If you can't find an application suitable for your pipeline, contact the user support or you can try to install it on your own