Tassel

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Description

TASSEL is a bioinformatics software package that can analyze diversity for sequences, SNPs, or SSRs. Genotype/phenotype associations can be carried out by GLM or a mixed model. Estimates distance and linkage disequilibrium statistics

Availability

Program is available in version 3.0

Use

Initialize enviroment

module add tassel-3.0

and run command tassel.

Notice: This application use or needs GUI – graphical interface. To use the application in graphical mode see Remote desktop or X-Window.

License

GNU GPL 2.1 GNU GPL

Documentation

Documentation is available in pdf.

Program administrator

meta@cesnet.cz

Homepage

URL: http://www.maizegenetics.net/#!tassel/c17q9