SCIPION

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Description

Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy.

Usage

Upcoming modulesystem change alert!

Due to large number of applications and their versions it is not practical to keep them explicitly listed at our wiki pages. Therefore an upgrade of modulefiles is underway. A feature of this upgrade will be the existence of default module for every application. This default choice does not need version number and it will load some (usually latest) version.

You can test the new version now by adding a line

source /cvmfs/software.metacentrum.cz/modulefiles/5.1.0/loadmodules

to your script before loading a module. Then, you can list all versions of scipion and load default version of scipion as

module avail scipion/ # list available modules
module load scipion   # load (default) module


If you wish to keep up to the current system, it is still possible. Simply list all modules by

module avail scipion

and choose explicit version you want to use.

Notice: This application use or needs GUI – graphical interface. To use the application in graphical mode see Remote desktop or X-Window.

Documentation

The SCIPION documentation is available on the https://github.com/I2PC/scipion/wiki

Homepage

URL: http://scipion.cnb.csic.es/m/