RAxML-NG

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Description

RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. Its search heuristic is based on iteratively performing a series of Subtree Pruning and Regrafting (SPR) moves, which allows to quickly navigate to the best-known ML tree. RAxML-NG is a successor of RAxML (Stamatakis 2014) and leverages the highly optimized likelihood computation implemented in libpll (Flouri et al. 2014).

Availability

version 8


Use

module add raxml-ng-8

raxml-ng --help


Documentation

https://github.com/amkozlov/raxml-ng/wiki/Tutorial


Licence

Public

Program manager

meta@cesnet.cz

Homepage

https://github.com/amkozlov/raxml-ng