Perl - modules

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Description

Perl programming language supports extensions in the form of so called 'modules'. To ease the administration of such modules we grouped them into one SW package (module). These packages are dependent on the Perl.

Availability

Freely available to all MetaCentrum users. Module list:

Module name Included Perl modules
bioperl-1.6.1 Ace (1.92), Acme::Damn (0.05), Algorithm::Munkres (0.08), App::cpanminus (1.7001), Archive::Zip (1.37), Array::Compare (2.02), BerkeleyDB (0.54), Bio (), Bio::Run (), Bit::Vector (7.3), CPAN::DistnameInfo (0.12), CPAN::Meta (2.132830), CPAN::Meta::Check (0.008), CPAN::Meta::Requirements (2.125), CPAN::Meta::YAML (0.010), Cache::Cache (1.06), Carp::Clan (6.04), Class::Data::Inheritable (0.08), Class::Load (0.20), Clone (0.35), Convert::Binary::C (0.76), Crypt::RC4 (2.02), DBD::SQLite (1.40), Data (), Data::OptList (0.108), Devel::GlobalDestruction (0.12), Devel::GlobalDestruction::XS (0.01), Devel::StackTrace (1.30), Digest::Perl::MD5 (1.8), Dist::CheckConflicts (0.09), Eval::Closure (0.11), Exception::Class (1.37), File::Slurp (9999.19), File::Which (1.09), Graph (0.96), IO::All (0.51), IO::Prompt (0.997002), IPC::Run3 (0.046), IPC::System::Simple (1.25), Inline (0.53), JSON::PP (2.27203), List::MoreUtils (0.33), MRO::Compat (0.12), Math::Derivative (undef), Math::Random (0.71), Math::Spline (0.02), Module::Implementation (0.07), Module::Metadata (1.000019), Module::Runtime (0.013), Moose (2.1005), OLE::Storage_Lite (0.19), PPM (undef), Package::DeprecationManager (0.13), Package::Stash (0.36), Package::Stash::XS (0.28), Params::Util (1.07), Perl (5.10.1), Perl::OSType (1.007), Perl::Unsafe::Signals (0.02), PerlIO::gzip (0.18), PostScript::Metrics (0.06), Probe::Perl (0.03), Proc::ProcessTable (0.50), SVG (2.59), SVG::Graph (0.02), Set::Scalar (1.26), Spreadsheet::ParseExcel (0.59), Spreadsheet::WriteExcel (2.40), Statistics::Descriptive (3.0605), Sub::Exporter (0.987), Sub::Exporter::Progressive (0.001011), Sub::Install (0.927), Sub::Name (0.05), Sub::Uplevel (0.24), Sys::SigAction (0.21), Term::ReadKey (2.31), Test::CheckDeps (0.010), Test::Deep (0.110), Test::Differences (0.61), Test::Exception (0.32), Test::Fatal (0.013), Test::Most (0.31), Test::NoWarnings (1.04), Test::Requires (0.06), Test::Script (1.07), Test::Warn (0.24), Text::Diff (1.41), Tree::DAG_Node (1.18), Try::Tiny (0.18), Want (0.22), XML::DOM::XPath (0.14), XML::Filter::BufferText (1.01), XML::SAX::Writer (0.53), XML::Twig (3.44), XML::Writer (0.623), XML::XPathEngine (0.14), YAML (0.81), YAML::Syck (1.25), bin::pairfq (), forks (0.34)

Licence

Differs according to used Perl module.

Use

Initialize environment with command:

module add bioperl-1.6.1

You can also install your own Perl module, see SW installation for details.

To list all available perl modules you can use script perl_installed_modules.pl. Usage:

module add bioperl-1.6.1
perl_installed_modules.pl

Documentation

Perl modules documentation is available through CPAN.

Program manager

meta@cesnet.cz

Homepage

URL: http://www.cpan.org/