MetaBAT

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Description

MetaBAT, An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities

License

If you have questions about your rights to use or distribute this software, please contact Berkeley Lab's technology transfer department at TTD@lbl.gov referring to "MetaBAT (2014-075)."

Usage

Upcoming modulesystem change alert!

Due to large number of applications and their versions it is not practical to keep them explicitly listed at our wiki pages. Therefore an upgrade of modulefiles is underway. A feature of this upgrade will be the existence of default module for every application. This default choice does not need version number and it will load some (usually latest) version.

You can test the new version now by adding a line

source /cvmfs/software.metacentrum.cz/modulefiles/5.1.0/loadmodules

to your script before loading a module. Then, you can list all versions of metabat and load default version of metabat as

module avail metabat/ # list available modules
module load metabat   # load (default) module


If you wish to keep up to the current system, it is still possible. Simply list all modules by

module avail metabat

and choose explicit version you want to use.

Documentation

https://bitbucket.org/berkeleylab/metabat

Homepage

https://bitbucket.org/berkeleylab/metabat