Merqury

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Description

Evaluate genome assemblies with k-mers and more Often, genome assembly projects have illumina whole genome sequencing reads available for the assembled individual. The k-mer spectrum of this read set can be used for independently evaluating assembly quality without the need of a high quality reference. Merqury provides a set of tools for this purpose.

Availability

vesion 1.1


Use

module add conda-modules-py37

conda activate merqury

merqury.sh

Documentation

https://github.com/marbl/merqury


Licence

Public

Program manager

meta@cesnet.cz

Homepage

https://github.com/marbl/merqury