MaSuRCA is whole genome assembly software. It combines the efficiency of the de Bruijn graph and Overlap-Layout-Consensus (OLC) approaches. MaSuRCA can assemble data sets containing only short reads from Illumina sequencing or a mixture of short reads and long reads (Sanger, 454).
Version 3.2.6 (optimalized for running locally, not using AFS) is freely available to users. Module:
Initialize environment with command:
module add masurca-3.2.6loc9
Masurca is quite greedy sw, use