MaSuRCA is whole genome assembly software. It combines the efficiency of the de Bruijn graph and Overlap-Layout-Consensus (OLC) approaches. MaSuRCA can assemble data sets containing only short reads from Illumina sequencing or a mixture of short reads and long reads (Sanger, 454).
Version 2.1.0 and 3.2.2 Freely available to users. Modules:
Initialize environment with command:
module add masurca-2.1.0 module add masurca-3.2.2
Documentation: http://www.genome.umd.edu/masurca_compile.html or locally in /software/masurca-2.1.0/doc/MaSuRCA_QuickStartGuide.pdf and /software/Masurca/3.2.2/MaSuRCA_QuickStartGuide.pdf (for version 3.2.1).