Ltrdigest

Z MetaCentrum
Přejít na: navigace, hledání

Description

Software tool for identification and annotation of characteristic sequence features of LTR retrotransposons in predicted candidates. In particular, LTRdigest can be used to find protein domains, polypurine tracts and primer binding sites.

Availability

version 1.3.3 and 1.5.1-gcc

Use

module add ltrdigest-1.5.1-gcc

This makes available the path to the program binaries.

Documentation

http://www.zbh.uni-hamburg.de/fileadmin/gi/LTRdigest/ltrdigestman.pdf

Licence

http://genometools.org/license.html

Program manager

meta@cesnet.cz

Homepage

http://www.zbh.uni-hamburg.de/?id=207