Kraken2

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Description

Kraken 2 is the newest version of Kraken, a taxonomic classification system using exact k-mer matches to achieve high accuracy and fast classification speeds. This classifier matches each k-mer within a query sequence to the lowest common ancestor (LCA) of all genomes containing the given k-mer. The k-mer assignments inform the classification algorithm.

Availability

version 1.0


Use

module add  kraken2-1.0 
 


Documentation

https://ccb.jhu.edu/software/kraken2/index.shtml?t=manual


Licence

Public

Program manager

meta@cesnet.cz

Homepage

https://ccb.jhu.edu/software/kraken2/index.shtml