The GenomeTools genome analysis system is a free collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary named gt. It is based on a C library named “libgenometools” which consists of several modules. Includes also the tool LTRdigest.
Version 1.6.1. Freely available to all users. The modules have names
genometools-1.3.3 (ltrdigest-1.3.3) genometools-1.5.1-gcc (ltrdigest-1.5.1-gcc)
Free license based on OpenBSD model.
You can load the module via the command
module add genometools-1.3.3
The module load makes available the program path and also paths to openmpi-1.6, which enables job parallelization.
http://genometools.org/documentation.html and http://www.zbh.uni-hamburg.de/?id=207. Except that is available the LTRdigest manual. When not on web anymore, use the local copy in directory /software/ltrdigest-1.5.1/docs.