Coot

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Description

Coot is for macromolecular model building, model completion and validation, particularly suitable for protein modelling using X-ray data. Coot displays maps and models and allows model manipulations such as idealization, real space refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers, Ramachandran plots, skeletonization, non-crystallographic symmetry and more.

Availability

In module

  • Module coot-0.8.9

Use

Steps to run the application

$ module add coot-0.8.9a
module add gui
gui start

And after then in the GUI

coot

Despite the Coot is graphics program, it needs GUI (therefore there is needed gui module). More information about running GUI application in MetaCentrum you can find at the page Remote Desktop

Documentation

Licence

Mostly GPLv3, some GLPv2+, some LGPLv3.

Program administrator

meta@cesnet.cz

Homepage

URL: https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/