Cap3-pCap

From MetaCentrum
Jump to navigation Jump to search

Description

Assembler for Solexa generated data.

License

Freely available for use at non-profit organizations.

Usage

Upcoming modulesystem change alert!

Due to large number of applications and their versions it is not practical to keep them explicitly listed at our wiki pages. Therefore an upgrade of modulefiles is underway. A feature of this upgrade will be the existence of default module for every application. This default choice does not need version number and it will load some (usually latest) version.

You can test the new version now by adding a line

source /cvmfs/software.metacentrum.cz/modulefiles/5.1.0/loadmodules

to your script before loading a module. Then, you can list all versions of cap3-pcap and load default version of cap3-pcap as

module avail cap3-pcap/ # list available modules
module load cap3-pcap   # load (default) module


If you wish to keep up to the current system, it is still possible. Simply list all modules by

module avail cap3-pcap

and choose explicit version you want to use.

Documentation

http://seq.cs.iastate.edu/

Homepage

http://seq.cs.iastate.edu/