Bcftools

Description

BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.

Availability

Available modules:

 bcftools-1.9
 bcftools-1.6
 bcftools-1.3.1

Licence

GNU GPL v3

Use

You can load the module via the command

module add bcftools-1.6

Documentation

https://samtools.github.io/bcftools/bcftools.html

Program manager

meta@cesnet.cz

Homepage

https://samtools.github.io/bcftools/bcftools.htmll