Amos

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Description

The AMOS consortium is committed to the development of open-source whole genome assembly software. The project acronym (AMOS) represents our primary goal -- to produce A Modular, Open-Source whole genome assembler.

License

Artistic license

Usage

Upcoming modulesystem change alert!

Due to large number of applications and their versions it is not practical to keep them explicitly listed at our wiki pages. Therefore an upgrade of modulefiles is underway. A feature of this upgrade will be the existence of default module for every application. This default choice does not need version number and it will load some (usually latest) version.

You can test the new version now by adding a line

source /cvmfs/software.metacentrum.cz/modulefiles/5.1.0/loadmodules

to your script before loading a module. Then, you can list all versions of amos and load default version of amos as

module avail amos/ # list available modules
module load amos   # load (default) module


If you wish to keep up to the current system, it is still possible. Simply list all modules by

module avail amos

and choose explicit version you want to use.

bank-transact

Documentation

http://sourceforge.net/apps/mediawiki/amos/index.php?title=AMOS_Getting_Started

Homepage

https://sourceforge.net/projects/amos/