ASTRAL

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Description

ASTRAL is a tool for estimating an unrooted species tree given a set of unrooted gene trees. ASTRAL is statistically consistent under the multi-species coalescent model (and thus is useful for handling incomplete lineage sorting, i.e., ILS). ASTRAL finds the species tree that has the maximum number of shared induced quartet trees with the set of gene trees, subject to the constraint that the set of bipartitions in the species tree comes from a predefined set of bipartitions.

Availability

version 5.7.7


Use

module add astral-5.7.7

astral --help

Documentation

https://github.com/smirarab/ASTRAL


Licence

Public

Program manager

meta@cesnet.cz

Homepage

https://github.com/smirarab/ASTRAL