MetaCentrum Application List

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Metacentrum wiki is deprecated after March 2023
Dear users, due to integration of Metacentrum into https://docs.e-infra.cz e-INFRA CZ service, the documentation for users will change format and site.
The current wiki pages won't be updated after end of March 2023. They will, however, be kept for a few months for backwards reference.
The new documentation resides at https://docs.metacentrum.cz.

Computational chemistry / Molecular modelling

Computational chemistry methods serve for computational simulations of real biological behaviour and chemical reactions and processes.

Structural biology, biology and bioinformatics

Structural biology is a branch of molecular biology, biochemistry, and biophysics concerned with the molecular structure of biological macromolecules, especially proteins and nucleic acids, how they acquire the structures they have, and how alterations in their structures affect their function.

Aligners

Annotation

Assemblers

Gene expression analysis

Metagenomics

Multipurpose bioinformatic packages

Others

Phylogenetics

Population genetics

Sequence data processing

Sequence error correction

Visualisation

Technical and material simulations

MetaCentrum have available huge range of top-level programs from computational fluid dynamics, computational solid mechanics and associated disciplines.

Mathematical and statistical modelling

The common standard mathematical and statistical packages are in MetaCentrum available as well, of course.

Image, video and sound processing

Development tools and environments

Moreover, MetaCentrum offers also an access to professional development tools.

Various other tools

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